Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6868

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314323 to 315416 15237

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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312,213 - 15235 mRNA_6867 0.70 -0.2
312,271 + 15235 mRNA_6867 0.73 0.9
312,459 - 15235 mRNA_6867 0.80 -0.3
312,546 - 15235 mRNA_6867 0.84 0.7
312,571 + 15235 mRNA_6867 0.85 0.2
312,835 - -0.7
313,092 - 15236 mRNA_6868 0.14 -1.1
313,190 + 15236 mRNA_6868 0.30 -1.1
313,195 - 15236 mRNA_6868 0.31 -0.5
313,441 + 15236 mRNA_6868 0.69 -0.6
313,458 - 15236 mRNA_6868 0.71 -0.9
313,466 + 15236 mRNA_6868 0.73 -0.8
313,563 + 15236 mRNA_6868 0.88 0.1
313,585 + 1.4
313,702 + -0.2
313,705 - -0.9
313,706 - -2.6
313,710 - -0.3
313,710 + -1.2
313,712 + -1.5
313,731 + 0.1
313,741 + 1.5
313,908 + -0.3
313,985 - 0.6
314,020 + 0.6