Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6843

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6842: 15210 - K02605 ORC3 origin recognition complex subunit 3, at 248976 to 251916 15210 mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252039 to 252813 15211 mRNA_6844: 15212 - K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101, at 253096 to 258115 15212

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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251,863 + -0.3
252,000 - 1.0
252,000 - -0.1
252,147 + 15211 mRNA_6843 0.14 -1.3
252,160 - 15211 mRNA_6843 0.16 -1.8
252,165 + 15211 mRNA_6843 0.16 -0.7
252,315 + 15211 mRNA_6843 0.36 -0.7
252,324 - 15211 mRNA_6843 0.37 -1.8
252,330 - 15211 mRNA_6843 0.38 0.1
252,416 - 15211 mRNA_6843 0.49 -2.2
252,599 - 15211 mRNA_6843 0.72 -1.8
252,610 - 15211 mRNA_6843 0.74 -2.6
253,184 - 0.5
253,309 + 1.3
253,494 - 1.0
253,665 + 15212 mRNA_6844 0.11 0.9
253,724 + 15212 mRNA_6844 0.13 -0.0
253,733 - 15212 mRNA_6844 0.13 0.9
253,761 - 15212 mRNA_6844 0.13 -0.6
253,788 + 15212 mRNA_6844 0.14 0.8