Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6797

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6796: 15164 - Hypothetical Protein, at 155550 to 156068 15164 mRNA_6797: 15165 - BLAST Formin-like protein 3 [Rhizoctonia solani], at 156306 to 160746 15165 mRNA_6798: 15166 - Hypothetical Protein, at 161336 to 161885 15166

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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155,324 - 0.3
155,337 + -0.5
155,446 + 0.7
155,462 - 0.4
155,481 + 1.7
155,498 + 1.3
155,626 - 15164 mRNA_6796 0.15 0.3
155,632 - 15164 mRNA_6796 0.16 0.3
155,646 - 15164 mRNA_6796 0.18 1.4
155,651 + 15164 mRNA_6796 0.19 0.1
155,708 - 15164 mRNA_6796 0.30 0.4
155,754 - 15164 mRNA_6796 0.39 -0.1
155,771 - 15164 mRNA_6796 0.43 0.1
155,773 + 15164 mRNA_6796 0.43 -0.5
155,774 - 15164 mRNA_6796 0.43 1.1
155,778 - 15164 mRNA_6796 0.44 0.7
155,784 + 15164 mRNA_6796 0.45 -0.3
155,795 + 15164 mRNA_6796 0.47 -0.1
155,795 + 15164 mRNA_6796 0.47 1.4
155,799 + 15164 mRNA_6796 0.48 -1.3
155,809 + 15164 mRNA_6796 0.50 -0.4
155,811 + 15164 mRNA_6796 0.50 2.4
155,822 - 15164 mRNA_6796 0.52 -1.4
155,916 - 15164 mRNA_6796 0.71 -1.4
155,938 - 15164 mRNA_6796 0.75 1.7
155,943 - 15164 mRNA_6796 0.76 0.3
155,953 - 15164 mRNA_6796 0.78 -0.0
155,963 + 15164 mRNA_6796 0.80 -3.6
156,099 - 0.7
156,108 + 1.8
156,117 - -0.7
156,410 + 1.0
156,498 - 0.1
156,519 - 1.9
156,679 - 0.1
156,679 - 1.6
156,918 + 15165 mRNA_6797 0.14 2.0
156,919 - 15165 mRNA_6797 0.14 1.6
156,921 + 15165 mRNA_6797 0.14 -1.6
157,228 - 15165 mRNA_6797 0.21 -0.5
157,256 - 15165 mRNA_6797 0.21 0.9
157,410 - 15165 mRNA_6797 0.25 0.6
157,670 - 15165 mRNA_6797 0.31 -0.8
157,966 - 15165 mRNA_6797 0.37 -0.1
158,738 + 15165 mRNA_6797 0.55 -1.7
159,110 + 15165 mRNA_6797 0.63 1.1
159,436 - 15165 mRNA_6797 0.70 1.9
159,605 + 15165 mRNA_6797 0.74 0.3
159,732 + 15165 mRNA_6797 0.77 1.7
159,961 - 15165 mRNA_6797 0.82 1.5
160,150 + 15165 mRNA_6797 0.87 -0.2
160,230 + 15165 mRNA_6797 0.88 1.2
160,238 + 15165 mRNA_6797 0.89 -1.5
160,268 + 15165 mRNA_6797 0.89 1.0
160,341 + 0.0
160,418 - -0.2
160,438 - -0.1
160,467 - -1.0
160,524 + -1.5
160,557 - 1.7
160,630 - -3.2
160,647 + 0.3
160,705 - -1.6
160,710 + -0.2
160,731 - 0.4
160,731 - -0.1
160,742 - 1.4
160,781 - -1.9
160,830 - -1.3
160,870 + -0.3
160,923 - 1.2
160,960 - 0.5
160,961 - -0.7
160,968 + -0.1
161,004 - -0.3
161,018 + 0.3
161,039 - -0.2
161,058 - 0.8
161,085 - 0.1
161,100 - 1.2
161,104 + -0.2
161,105 - 0.3
161,108 + -0.5
161,109 - -0.1
161,117 + 1.1
161,117 - -1.5
161,120 - -0.3
161,120 - 0.1
161,144 + -0.4
161,149 - 0.3
161,187 - 0.5
161,187 - -0.2
161,188 + -0.6
161,202 - 2.0
161,207 + 0.8
161,210 + -0.4
161,213 + -0.4
161,224 - -0.8
161,224 - -0.0
161,228 - 1.9
161,229 + 0.6
161,235 - -1.2
161,249 - 0.9
161,249 - -1.3
161,250 + 0.4
161,251 + 0.3
161,254 + 0.5
161,254 + 0.0
161,254 + -0.6
161,256 - -0.9
161,257 + -0.5
161,261 - -0.4
161,263 + -0.2
161,264 + 0.1
161,264 + -0.6
161,272 + -0.6
161,275 + -0.2
161,278 - 3.5
161,280 - -1.1
161,302 + 0.5
161,311 - 0.2
161,333 + -0.9
161,402 - 15166 mRNA_6798 0.12 1.3
161,416 - 15166 mRNA_6798 0.15 -0.8
161,424 + 15166 mRNA_6798 0.16 0.5
161,427 - 15166 mRNA_6798 0.17 -0.6
161,431 - 15166 mRNA_6798 0.17 1.3
161,462 - 15166 mRNA_6798 0.23 -0.5
161,565 + 15166 mRNA_6798 0.42 1.4
161,642 + 15166 mRNA_6798 0.56 -0.6