Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6726

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094 mRNA_6727: 15095 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 3595 to 4704 15095

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,318 - 1.9
1,688 + -2.0
1,688 + -0.3
1,714 - 0.1
1,889 - 1.5
1,889 - -0.5
2,290 + 15094 mRNA_6726 0.33 -0.1
2,349 - 15094 mRNA_6726 0.36 -2.0
2,383 - 15094 mRNA_6726 0.38 -0.1
2,391 - 15094 mRNA_6726 0.38 0.8
2,422 - 15094 mRNA_6726 0.40 0.3
2,442 - 15094 mRNA_6726 0.41 0.4
2,472 + 15094 mRNA_6726 0.43 0.2
2,475 - 15094 mRNA_6726 0.43 -0.7
2,531 - 15094 mRNA_6726 0.47 -1.7
2,889 - 15094 mRNA_6726 0.68 -1.2
2,898 + 15094 mRNA_6726 0.68 -0.2
2,928 + 15094 mRNA_6726 0.70 0.8
2,957 - 15094 mRNA_6726 0.72 -1.6
3,026 + 15094 mRNA_6726 0.76 0.4
3,149 + 15094 mRNA_6726 0.83 -0.0
3,291 + -3.0
3,296 - -0.3
3,335 + 4.3
3,462 + -0.9
3,566 - -0.9
3,745 + 15095 mRNA_6727 0.14 -0.7
3,751 - 15095 mRNA_6727 0.14 0.5
3,878 + 15095 mRNA_6727 0.25 -0.8
4,005 + 15095 mRNA_6727 0.37 0.5