Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6695

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6695: 15063 - K01045 PON arylesterase / paraoxonase, at 1465595 to 1467254 15063 mRNA_6696: 15064 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1467574 to 1471494 15064

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,464,829 + 1.3
1,464,945 + -1.5
1,464,948 - 1.2
1,464,969 + -0.8
1,465,095 - -0.2
1,465,115 + 2.4
1,465,115 + 1.0
1,465,122 - 0.2
1,465,133 + 1.3
1,465,133 + 0.8
1,465,137 - -1.1
1,465,279 + -0.7
1,465,281 + 0.5
1,465,381 - -0.4
1,465,424 + 0.5
1,465,455 - 0.0
1,465,738 + -0.2
1,466,021 - 15063 mRNA_6695 0.26 -1.8
1,466,027 + 15063 mRNA_6695 0.26 0.6
1,466,091 - 15063 mRNA_6695 0.30 -0.5
1,466,279 + 15063 mRNA_6695 0.41 0.0
1,466,852 - 15063 mRNA_6695 0.76 0.4
1,466,878 + 15063 mRNA_6695 0.77 -0.5
1,466,891 + 15063 mRNA_6695 0.78 -0.3
1,466,996 - 15063 mRNA_6695 0.84 0.9
1,466,998 - 15063 mRNA_6695 0.85 0.7
1,467,019 + 15063 mRNA_6695 0.86 1.4
1,467,155 + 0.2
1,467,158 - 0.2
1,467,178 + 0.1
1,467,298 + 0.8
1,467,325 - 0.2
1,467,333 - 1.1
1,467,336 - 1.3
1,467,352 + 0.4
1,467,355 + 1.1
1,467,497 + 0.3
1,467,605 + 1.0
1,467,772 + 1.9
1,467,810 + -0.5
1,467,927 + -0.8
1,468,243 + 15064 mRNA_6696 0.17 0.7
1,468,251 + 15064 mRNA_6696 0.17 -0.4