Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6669

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1403534 to 1406837 15036 mRNA_6669: 15037 - K03564 BCP, PRXQ, DOT5 peroxiredoxin Q/BCP, at 1407006 to 1408136 15037 mRNA_6670: 15038 - K03676 grxC, GLRX, GLRX2 glutaredoxin 3, at 1408478 to 1409380 15038

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,406,352 - 15036 mRNA_6668 0.85 -0.3
1,406,384 - 15036 mRNA_6668 0.86 -1.4
1,406,799 - -0.4
1,406,831 - -0.2
1,406,955 + -0.6
1,406,989 + 0.1
1,407,268 + 15037 mRNA_6669 0.23 -0.8
1,407,361 - 15037 mRNA_6669 0.31 0.3
1,407,460 + 15037 mRNA_6669 0.40 -0.6
1,407,538 - 15037 mRNA_6669 0.47 -0.6
1,407,553 + 15037 mRNA_6669 0.48 -0.3
1,407,957 - 15037 mRNA_6669 0.84 0.6
1,408,414 + -0.5
1,408,720 - 15038 mRNA_6670 0.27 -2.7
1,408,853 + 15038 mRNA_6670 0.42 -0.4
1,408,992 - 15038 mRNA_6670 0.57 -0.8