Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6656

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1358691 to 1359757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1360120 to 1362447 15024

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,359,380 + 15023 mRNA_6655 0.65 1.5
1,359,479 - 15023 mRNA_6655 0.74 -0.5
1,359,515 + 15023 mRNA_6655 0.77 0.4
1,359,624 - 15023 mRNA_6655 0.87 0.2
1,359,639 - 15023 mRNA_6655 0.89 -1.4
1,359,644 - 15023 mRNA_6655 0.89 0.6
1,359,650 - 15023 mRNA_6655 0.90 0.5
1,359,840 - -0.3
1,359,851 - 0.6
1,359,861 - -0.3
1,359,869 - 0.0
1,359,881 + -0.5
1,359,945 - -0.4
1,360,009 - 0.6
1,360,011 + -0.1
1,360,044 + 1.4
1,360,398 - 15024 mRNA_6656 0.12 1.0
1,360,438 - 15024 mRNA_6656 0.14 -0.6
1,360,563 - 15024 mRNA_6656 0.19 0.3
1,360,994 + 15024 mRNA_6656 0.38 -0.8
1,362,299 - 0.5
1,362,408 + -0.6
1,362,441 + 0.0
1,362,725 + -0.9
1,362,726 + 2.1
1,362,855 + 0.8
1,362,865 - 1.2
1,362,870 + 0.9
1,362,884 + 0.5
1,363,016 + 1.5
1,363,019 - 0.0
1,363,038 + -0.0
1,363,044 - -0.4
1,363,048 + 2.2
1,363,049 - 0.5
1,363,062 - 1.4
1,363,175 + -0.0
1,363,182 - 0.7
1,363,184 - -1.2
1,363,187 + 2.0
1,363,190 - -0.7
1,363,191 + -0.4
1,363,211 + -0.5
1,363,324 - 0.0
1,363,331 - 0.1
1,363,346 + 1.6
1,363,353 + 1.2
1,363,357 - 2.1
1,363,374 + -0.1
1,363,429 - -1.2
1,363,445 - 0.0
1,363,446 - -0.2
1,363,446 + 0.1