Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6623

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6622: 14990 - Hypothetical Protein, at 1270979 to 1271740 14990 mRNA_6623: 14991 - Hypothetical Protein, at 1272208 to 1273680 14991 mRNA_6624: 14992 - Hypothetical Protein, at 1274001 to 1275291 14992

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,271,256 - 14990 mRNA_6622 0.36 0.1
1,271,488 + 14990 mRNA_6622 0.67 1.6
1,271,634 + 14990 mRNA_6622 0.86 -0.6
1,271,790 + 0.4
1,271,906 - -0.2
1,271,915 + 2.3
1,271,965 + -0.6
1,271,970 - -1.3
1,272,047 - -2.0
1,272,065 + 0.5
1,272,083 - 0.1
1,272,236 + 1.2
1,272,449 - 14991 mRNA_6623 0.16 0.3
1,272,526 - 14991 mRNA_6623 0.22 1.6
1,272,526 - 14991 mRNA_6623 0.22 -0.3
1,272,535 - 14991 mRNA_6623 0.22 -1.3
1,272,697 - 14991 mRNA_6623 0.33 0.6
1,272,968 - 14991 mRNA_6623 0.52 -0.3
1,273,099 + 14991 mRNA_6623 0.60 0.0
1,273,234 + 14991 mRNA_6623 0.70 1.2
1,273,574 - -1.7
1,273,574 + 0.3
1,273,839 + 0.9
1,274,028 - 0.9
1,274,059 + -0.2
1,274,062 + 0.0
1,274,062 + 0.8
1,274,097 - 1.1
1,274,131 - 14992 mRNA_6624 0.10 -1.2
1,274,196 + 14992 mRNA_6624 0.15 -1.3
1,274,247 + 14992 mRNA_6624 0.19 -0.3
1,274,304 - 14992 mRNA_6624 0.23 0.7
1,274,610 - 14992 mRNA_6624 0.47 1.8
1,274,629 + 14992 mRNA_6624 0.49 0.3
1,274,636 - 14992 mRNA_6624 0.49 0.8
1,274,638 + 14992 mRNA_6624 0.49 0.0