Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6574

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1136818 to 1137633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1137954 to 1139326 14942 mRNA_6575: 14943 - KOG0440 Cell cycle-associated protein Mob1-1, at 1139810 to 1140979 14943

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,138,083 - 0.7
1,138,083 + 0.1
1,138,114 - 14942 mRNA_6574 0.12 -0.6
1,138,251 - 14942 mRNA_6574 0.22 -0.4
1,138,262 + 14942 mRNA_6574 0.22 -1.6
1,138,409 - 14942 mRNA_6574 0.33 0.0
1,138,528 - 14942 mRNA_6574 0.42 -0.6
1,138,678 + 14942 mRNA_6574 0.53 -0.3
1,138,929 - 14942 mRNA_6574 0.71 -0.5
1,138,977 + 14942 mRNA_6574 0.75 -0.3
1,139,105 - 14942 mRNA_6574 0.84 1.7
1,139,112 - 14942 mRNA_6574 0.84 0.3
1,139,112 - 14942 mRNA_6574 0.84 -1.5
1,139,117 + 14942 mRNA_6574 0.85 1.1
1,139,134 + 14942 mRNA_6574 0.86 -1.5
1,139,263 - 1.0
1,139,419 + 1.0
1,139,427 + 0.2
1,139,538 - 0.9
1,139,541 - 0.1
1,139,560 + -0.1
1,139,562 - 1.5
1,139,564 - 0.8
1,139,576 - 0.1
1,139,579 + 0.1
1,139,584 - -0.5
1,139,708 - 3.6
1,139,857 + 1.7
1,139,876 + 2.8