Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6518

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975368 to 982291 14885 mRNA_6518: 14886 - K05712 mhpA 3-(3-hydroxy-phenyl)propionate hydroxylase, at 982415 to 984966 14886 mRNA_6519: 14887 - K11806 WDSOF1 WD repeat and SOF domain-containing protein 1, at 985258 to 987431 14887

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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981,565 - 14885 mRNA_6517 0.90 0.8
982,082 - -0.3
982,684 + 14886 mRNA_6518 0.11 -0.1
982,845 + 14886 mRNA_6518 0.17 -0.1
983,458 + 14886 mRNA_6518 0.41 -1.9
983,573 - 14886 mRNA_6518 0.45 0.0
983,575 + 14886 mRNA_6518 0.45 0.2
983,907 + 14886 mRNA_6518 0.58 0.1
984,256 - 14886 mRNA_6518 0.72 0.3
984,283 - 14886 mRNA_6518 0.73 -1.3
984,416 + 14886 mRNA_6518 0.78 1.9
984,465 + 14886 mRNA_6518 0.80 0.1
984,749 + 2.1
984,750 + 0.0
984,753 - 0.2
984,756 + 2.4
985,016 - 0.1
985,029 + 0.6
985,030 + -1.1
985,031 - -0.2
985,042 - 0.8
985,057 + -0.5
985,057 - -1.1
985,069 + 0.3
985,084 - -0.3
985,088 - 0.4
985,112 + -0.8
985,172 + 0.3
985,183 - 0.9
985,205 - 0.6
985,208 + -0.6
985,241 + -0.2