Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6470

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6469: 14837 - K10625 UBR1 E3 ubiquitin-protein ligase UBR1, at 858043 to 864348 14837 mRNA_6470: 14838 - Hypothetical Protein, at 864745 to 865870 14838 mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866226 to 867912 14839

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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863,932 - -2.1
863,938 - -2.0
864,093 - -2.6
864,093 - -0.8
864,182 + -2.1
864,385 - 1.6
864,401 + -0.9
864,685 + -1.0
864,793 + 0.6
864,842 + -0.5
864,869 - 14838 mRNA_6470 0.11 0.2
864,977 + 14838 mRNA_6470 0.21 -0.4
864,979 + 14838 mRNA_6470 0.21 1.8
864,986 - 14838 mRNA_6470 0.21 0.4
865,031 + 14838 mRNA_6470 0.25 -1.9
865,139 + 14838 mRNA_6470 0.35 -0.3
865,170 + 14838 mRNA_6470 0.38 -1.2
865,302 - 14838 mRNA_6470 0.49 -0.2
865,573 - 14838 mRNA_6470 0.74 0.5
865,664 + 14838 mRNA_6470 0.82 0.3
865,695 + 14838 mRNA_6470 0.84 -1.9
865,760 + 1.4
865,873 + -1.1
866,120 - -0.2
866,129 - 0.3
866,143 - 0.1
866,179 - -2.5
866,273 - 0.3
866,341 + 1.2
866,343 - -0.5
866,344 + 1.3
866,431 + 14839 mRNA_6471 0.12 0.4
866,438 - 14839 mRNA_6471 0.13 0.2
866,438 - 14839 mRNA_6471 0.13 0.0
866,469 + 14839 mRNA_6471 0.14 1.3
866,608 + 14839 mRNA_6471 0.23 0.5
866,752 - 14839 mRNA_6471 0.31 0.5
866,769 + 14839 mRNA_6471 0.32 0.1