Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6446

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814 mRNA_6447: 14815 - Hypothetical Protein, at 816253 to 817256 14815

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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813,631 + 14813 mRNA_6445 0.83 1.1
813,643 + 14813 mRNA_6445 0.83 1.0
813,655 - 14813 mRNA_6445 0.83 1.8
813,664 - 14813 mRNA_6445 0.84 -0.3
813,810 - 14813 mRNA_6445 0.88 0.2
813,890 + 14813 mRNA_6445 0.90 1.1
813,922 + 0.6
813,929 + 0.2
813,989 - -0.1
814,010 + 1.8
814,041 - 0.7
814,055 - -0.9
814,072 + 0.5
814,076 - 0.7
814,196 - 0.6
814,209 + 0.4
814,211 + 0.0
814,222 + 0.3
814,317 - -0.0
814,335 + 0.6
814,357 + -0.4
814,364 - -0.1
814,487 - 1.4
814,500 - 0.4
814,717 - 14814 mRNA_6446 0.17 -2.7
814,718 + 14814 mRNA_6446 0.17 -2.5
814,742 - 14814 mRNA_6446 0.19 -0.0
814,796 + 14814 mRNA_6446 0.22 -0.1
814,881 - 14814 mRNA_6446 0.26 0.2
814,915 - 14814 mRNA_6446 0.28 0.5
814,920 + 14814 mRNA_6446 0.28 0.3
814,977 - 14814 mRNA_6446 0.31 -1.3
815,172 - 14814 mRNA_6446 0.42 -0.0
815,247 + 14814 mRNA_6446 0.46 0.2
815,420 - 14814 mRNA_6446 0.56 0.6
815,438 - 14814 mRNA_6446 0.57 -0.2
815,531 + 14814 mRNA_6446 0.62 -1.7
815,546 - 14814 mRNA_6446 0.63 0.4
815,566 + 14814 mRNA_6446 0.64 0.5
815,621 + 14814 mRNA_6446 0.67 2.5
815,670 + 14814 mRNA_6446 0.69 -0.4
815,680 + 14814 mRNA_6446 0.70 0.8
815,797 + 14814 mRNA_6446 0.76 2.0
815,823 + 14814 mRNA_6446 0.78 0.5
815,826 - 14814 mRNA_6446 0.78 -0.2
815,925 - 14814 mRNA_6446 0.83 0.7
815,928 - 14814 mRNA_6446 0.83 -2.7
815,929 + 14814 mRNA_6446 0.84 -0.3
815,930 - 14814 mRNA_6446 0.84 0.1
815,932 - 14814 mRNA_6446 0.84 1.1
816,063 + -0.1
816,069 - 1.6
816,098 + 0.4
816,200 - -0.7
816,580 + 14815 mRNA_6447 0.33 1.3
816,639 + 14815 mRNA_6447 0.38 0.5
816,944 + 14815 mRNA_6447 0.69 0.7
817,012 + 14815 mRNA_6447 0.76 1.0
817,058 + 14815 mRNA_6447 0.80 0.2
817,060 - 14815 mRNA_6447 0.80 -1.0