Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6441

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6440: 14808 - Hypothetical Protein, at 802192 to 802893 14808 mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803025 to 805267 14809 mRNA_6442: 14810 - Hypothetical Protein, at 805308 to 806483 14810

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
802,135 + -0.9
802,282 + 14808 mRNA_6440 0.13 0.4
802,556 - 14808 mRNA_6440 0.52 0.9
802,594 - 14808 mRNA_6440 0.57 -0.9
802,655 - 14808 mRNA_6440 0.66 1.1
802,696 + 14808 mRNA_6440 0.72 -0.9
802,729 - 14808 mRNA_6440 0.76 1.5
802,773 + 14808 mRNA_6440 0.83 0.2
802,844 - -1.0
802,908 + -0.5
803,674 - 14809 mRNA_6441 0.29 -3.6
803,750 - 14809 mRNA_6441 0.32 -1.2
804,305 + 14809 mRNA_6441 0.57 -4.0
804,328 - 14809 mRNA_6441 0.58 -2.8
804,424 + 14809 mRNA_6441 0.62 -3.0
804,711 + 14809 mRNA_6441 0.75 -1.6
804,715 + 14809 mRNA_6441 0.75 -5.5
805,114 - 0.3
805,131 + -4.1
805,151 - -1.3
805,182 + -3.4
805,306 + 0.3
805,315 + 1.1
805,328 + -0.5
805,353 + 0.1
805,447 - 14810 mRNA_6442 0.12 0.9
805,465 + 14810 mRNA_6442 0.13 0.7
805,469 + 14810 mRNA_6442 0.14 -0.6
805,488 - 14810 mRNA_6442 0.15 0.6
805,491 + 14810 mRNA_6442 0.16 0.7
805,503 + 14810 mRNA_6442 0.17 0.4
805,619 + 14810 mRNA_6442 0.26 -0.2
805,745 - 14810 mRNA_6442 0.37 0.7
805,757 - 14810 mRNA_6442 0.38 -0.0
805,766 + 14810 mRNA_6442 0.39 0.3
805,771 + 14810 mRNA_6442 0.39 0.5
805,960 + 14810 mRNA_6442 0.55 -0.7
805,990 + 14810 mRNA_6442 0.58 1.4
806,061 + 14810 mRNA_6442 0.64 -0.9
806,130 - 14810 mRNA_6442 0.70 1.5