Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6431

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798 mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799 mRNA_6432: 14800 - K18203 LCMT1 [phosphatase 2A protein]-leucine-carboxy methyltransferase, at 788062 to 789443 14800

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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785,797 + 14798 mRNA_6430 0.69 1.5
785,970 - 14798 mRNA_6430 0.85 -0.5
786,141 + -0.2
786,150 - 0.9
786,260 + 0.6
786,263 - 2.7
786,270 - 0.2
786,379 - -1.3
786,424 - -0.1
786,425 - -0.1
786,563 - -0.9
786,575 + 0.8
787,076 - 14799 mRNA_6431 0.49 -0.6
787,191 - 14799 mRNA_6431 0.59 0.1
787,205 - 14799 mRNA_6431 0.60 -0.2
787,294 - 14799 mRNA_6431 0.68 0.1
787,494 + 14799 mRNA_6431 0.85 0.5
787,554 + -0.1
787,884 - 1.8
787,897 - 0.4
788,026 - 0.2
788,246 - 14800 mRNA_6432 0.13 -0.6
788,330 - 14800 mRNA_6432 0.19 -0.4
788,465 + 14800 mRNA_6432 0.29 0.3