Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6430

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634 14797 mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798 mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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784,012 - 1.3
784,055 + -0.0
784,070 + -1.5
784,077 + 1.7
784,084 - -1.3
784,122 + -0.2
784,258 - 14797 mRNA_6429 0.20 -1.5
784,479 + 14797 mRNA_6429 0.67 1.4
784,808 - 2.9
784,827 - -1.4
784,827 + -0.6
784,924 + 0.2
784,941 - 2.4
784,968 + 1.1
784,972 - -1.0
784,976 + 0.1
784,980 + 0.1
785,096 + 0.3
785,100 - -0.1
785,101 + 0.3
785,103 + -0.4
785,113 - -0.3
785,124 - 14798 mRNA_6430 0.11 -0.1
785,141 - 14798 mRNA_6430 0.12 0.5
785,358 - 14798 mRNA_6430 0.31 -0.2
785,406 - 14798 mRNA_6430 0.35 0.5
785,406 - 14798 mRNA_6430 0.35 0.5
785,481 - 14798 mRNA_6430 0.42 -0.6
785,797 + 14798 mRNA_6430 0.69 1.5
785,970 - 14798 mRNA_6430 0.85 -0.5
786,141 + -0.2
786,150 - 0.9
786,260 + 0.6
786,263 - 2.7
786,270 - 0.2
786,379 - -1.3
786,424 - -0.1
786,425 - -0.1
786,563 - -0.9
786,575 + 0.8
787,076 - 14799 mRNA_6431 0.49 -0.6