Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6396

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6395: 14763 - K19403 MCPH1 microcephalin, at 713200 to 716170 14763 mRNA_6396: 14764 - Hypothetical Protein, at 716861 to 718717 14764 mRNA_6397: 14765 - K02976 RP-S26e, RPS26 small subunit ribosomal protein S26e, at 719574 to 720317 14765

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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715,875 + -0.3
715,882 - -1.8
716,019 + 0.4
716,020 - -0.1
716,308 - 0.4
716,328 - -1.0
716,347 - 0.1
716,356 - 0.1
716,396 - -0.4
716,456 + -0.1
716,479 + 0.0
716,517 + 1.5
717,077 + 14764 mRNA_6396 0.12 -0.2
717,232 - 14764 mRNA_6396 0.20 -0.5
717,237 + 14764 mRNA_6396 0.20 0.9
717,238 - 14764 mRNA_6396 0.20 0.5
717,357 - 14764 mRNA_6396 0.27 -0.1
717,371 + 14764 mRNA_6396 0.27 0.2
717,515 - 14764 mRNA_6396 0.35 0.1
717,517 + 14764 mRNA_6396 0.35 -0.1
717,525 + 14764 mRNA_6396 0.36 0.1
717,532 - 14764 mRNA_6396 0.36 1.2
717,555 + 14764 mRNA_6396 0.37 -0.0
717,642 - 14764 mRNA_6396 0.42 -0.0
717,656 + 14764 mRNA_6396 0.43 0.4
717,683 - 14764 mRNA_6396 0.44 -0.2
717,706 - 14764 mRNA_6396 0.46 1.2
717,732 - 14764 mRNA_6396 0.47 0.3
717,774 - 14764 mRNA_6396 0.49 0.7
717,793 - 14764 mRNA_6396 0.50 -1.4
717,815 - 14764 mRNA_6396 0.51 -0.3
717,824 + 14764 mRNA_6396 0.52 -1.1
717,967 - 14764 mRNA_6396 0.60 -0.4
717,967 + 14764 mRNA_6396 0.60 0.0
717,974 + 14764 mRNA_6396 0.60 -0.4
718,008 - 14764 mRNA_6396 0.62 0.0
718,122 - 14764 mRNA_6396 0.68 0.4
718,394 - 14764 mRNA_6396 0.83 -0.5
718,403 + 14764 mRNA_6396 0.83 2.5
718,579 + 0.6
718,717 - 3.5
718,717 - -0.2
718,732 + 1.3
718,738 - 0.9
718,746 + -0.3
718,873 + -0.3
718,878 - 0.4
718,890 - -0.4
718,893 + 0.4
718,900 + -0.1
719,020 - -0.7
719,020 + 0.0
719,027 + 1.0