Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6379

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6378: 14746 - K11884 PNO1, DIM2 RNA-binding protein PNO1, at 675035 to 675906 14746 mRNA_6379: 14747 - Hypothetical Protein, at 676687 to 677946 14747 mRNA_6380: 14748 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 678421 to 679401 14748

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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676,331 + 1.2
676,426 - 0.0
676,436 - 0.5
676,438 - 0.2
676,439 + -0.2
676,443 + 0.3
676,455 + 0.7
676,457 - 0.7
676,463 + 0.0
676,496 - -1.3
676,516 + 0.1
676,596 - 0.1
676,876 - 14747 mRNA_6379 0.15 2.2
676,915 + 14747 mRNA_6379 0.18 -1.1
677,335 - 14747 mRNA_6379 0.51 -0.6
677,351 + 14747 mRNA_6379 0.53 0.3
677,766 - 14747 mRNA_6379 0.86 1.4
677,780 - 14747 mRNA_6379 0.87 0.7
677,804 + 14747 mRNA_6379 0.89 -0.5
678,013 + -0.9
678,344 - 0.3
678,345 + -0.2
678,517 - -0.2
678,534 - 14748 mRNA_6380 0.12 -0.2
678,638 - 14748 mRNA_6380 0.22 1.6
678,649 - 14748 mRNA_6380 0.23 -0.1
678,675 - 14748 mRNA_6380 0.26 -2.2