Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6335

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6334: 14702 - Hypothetical Protein, at 573693 to 575624 14702 mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576114 to 577521 14703 mRNA_6336: 14704 - K14773 UTP23 U3 small nucleolar RNA-associated protein 23, at 577858 to 579187 14704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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575,144 - 14702 mRNA_6334 0.75 -0.7
575,255 + 14702 mRNA_6334 0.81 -0.4
575,390 + 14702 mRNA_6334 0.88 1.1
575,565 - 0.1
575,679 - -0.2
575,708 - -0.7
575,858 + -2.4
575,991 - 0.9
575,997 - -0.8
576,262 - 14703 mRNA_6335 0.11 -0.9
576,595 - 14703 mRNA_6335 0.34 0.1
576,650 - 14703 mRNA_6335 0.38 0.2
576,735 - 14703 mRNA_6335 0.44 -1.0
576,743 + 14703 mRNA_6335 0.45 -1.3
576,889 - 14703 mRNA_6335 0.55 -1.1
576,909 - 14703 mRNA_6335 0.56 -0.4
576,915 + 14703 mRNA_6335 0.57 -0.2
577,141 - 14703 mRNA_6335 0.73 -0.6
577,458 - -0.3
577,466 + -0.5
577,485 - -0.2
577,617 - -1.1
577,622 - -1.6
577,755 - 1.0
577,762 - -0.4
577,762 - -0.9
577,762 - -0.3
577,765 + 0.8
577,768 - 1.2