Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6331

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560667 to 562112 14698 mRNA_6331: 14699 - Hypothetical Protein, at 562963 to 566521 14699 mRNA_6332: 14700 - KOG0725 Reductases with broad range of substrate specificities, at 566790 to 568565 14700

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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562,063 + -2.0
562,152 + -0.3
562,175 + -0.2
562,287 - 0.1
562,314 - -0.0
562,321 + 0.5
562,328 - 1.1
562,407 - 1.9
562,467 - -0.4
562,471 + -0.0
562,477 + -1.0
562,480 - -0.1
562,484 - -0.1
562,491 + -0.8
562,496 - 0.8
562,497 + 0.8
562,501 + 0.1
562,503 - -0.1
562,507 + -0.6
562,507 + -0.6
562,511 + 2.1
562,518 + -0.6
562,617 - -0.2
562,619 + 0.8
562,622 - 0.1
562,623 + -0.5
562,624 + 1.4
562,624 + -0.2
562,632 + 1.2
562,633 + -0.4
562,640 - -0.9
562,641 - -0.0
562,646 + 1.2
562,658 + 0.8
562,927 - -0.2
562,932 - -0.5
562,932 - -1.8
562,933 + 0.9
562,942 - -0.3
562,955 + 0.8
563,107 - 1.3
563,239 - -0.6
563,360 + 14699 mRNA_6331 0.11 -0.9
563,386 + 14699 mRNA_6331 0.12 -0.7
563,812 + 14699 mRNA_6331 0.24 -1.1
563,821 - 14699 mRNA_6331 0.24 -0.7
563,833 + 14699 mRNA_6331 0.24 -2.2
563,986 - 14699 mRNA_6331 0.29 0.2
565,558 + 14699 mRNA_6331 0.73 0.5
565,574 + 14699 mRNA_6331 0.73 0.2
565,866 + 14699 mRNA_6331 0.82 -2.5
565,910 + 14699 mRNA_6331 0.83 0.2
566,026 + 14699 mRNA_6331 0.86 0.3
566,041 - 14699 mRNA_6331 0.86 -0.7
566,041 - 14699 mRNA_6331 0.86 0.0
566,452 - 0.1
566,515 - 0.7
566,521 + -1.0
566,530 + -0.0
566,541 + 1.7
566,626 - -1.3
566,654 - -0.2
566,657 + -0.4
566,658 - -0.2
566,749 - 0.5
566,816 - 1.0
566,901 + 0.6
566,929 + 0.0
567,109 + 14700 mRNA_6332 0.18 -0.1
567,228 - 14700 mRNA_6332 0.25 -1.8