Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6328

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555929 to 557274 14695 mRNA_6328: 14696 - Hypothetical Protein, at 558019 to 558735 14696 mRNA_6329: 14697 - BLAST clp1-like protein [Moniliophthora roreri MCA 2997], at 559094 to 560421 14697

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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557,226 - -0.3
557,251 + -1.1
557,266 - -0.8
557,284 - -0.9
557,379 + -0.1
557,382 - -1.4
557,401 - 1.8
557,402 - 0.7
557,402 + 0.2
557,410 - 0.6
557,412 - -0.4
557,414 - -0.9
557,419 + 0.0
557,419 + -1.1
557,423 + 0.0
557,454 + 0.2
557,543 - -0.3
557,547 - -0.0
557,554 - 1.1
557,555 - -0.1
557,556 - -0.5
557,560 - -0.9
557,568 + -1.0
557,575 + 1.1
557,575 + 0.3
557,594 + -0.6
557,594 + 0.3
557,669 + -0.0
557,671 - -0.6
557,673 + -0.4
557,686 + 2.3
557,688 - -0.9
557,689 - -0.8
557,690 - -1.0
557,690 - -0.2
557,694 - 0.3
557,695 - 0.3
557,700 + 1.0
557,700 + -0.2
557,704 + -0.7
557,707 + 0.9
557,709 - 0.0
557,710 - 1.6
557,713 + 0.2
557,719 - 0.1
557,739 - -1.0
557,749 + 0.4
557,752 - -0.0
557,753 + 0.0
557,755 - 0.7
557,757 - 0.6
557,793 + -1.4
557,901 - 1.6
558,036 - -0.5
558,043 + -0.3
558,045 + -0.3
558,055 + 0.8
558,096 - 14696 mRNA_6328 0.11 1.5
558,196 - 14696 mRNA_6328 0.25 0.6
558,339 + 14696 mRNA_6328 0.45 -0.9
558,481 + 14696 mRNA_6328 0.64 0.4
558,626 - 14696 mRNA_6328 0.85 0.6
558,742 - -1.9
558,750 + -0.8
558,776 - 0.3
558,890 + -0.5
559,016 - 0.4
559,125 - -0.9
559,219 - 1.5
559,226 + -2.3
559,229 - 14697 mRNA_6329 0.10 -0.8
559,349 - 14697 mRNA_6329 0.19 -0.0
559,352 - 14697 mRNA_6329 0.19 0.1
559,369 + 14697 mRNA_6329 0.21 0.3
559,377 - 14697 mRNA_6329 0.21 -4.4
559,383 - 14697 mRNA_6329 0.22 -1.4
559,388 - 14697 mRNA_6329 0.22 -1.0
559,390 - 14697 mRNA_6329 0.22 0.6
559,398 - 14697 mRNA_6329 0.23 0.7
559,401 - 14697 mRNA_6329 0.23 1.4
559,570 + 14697 mRNA_6329 0.36 -0.2
559,599 - 14697 mRNA_6329 0.38 0.4