Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6323

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6322: 14690 - K09420 MYB myb proto-oncogene protein, at 544392 to 544811 14690 mRNA_6323: 14691 - Hypothetical Protein, at 545405 to 548741 14691 mRNA_6324: 14692 - Hypothetical Protein, at 549404 to 551693 14692

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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544,595 + 14690 mRNA_6322 0.48 1.1
544,599 + 14690 mRNA_6322 0.49 0.4
544,605 + 14690 mRNA_6322 0.51 1.6
544,611 - 14690 mRNA_6322 0.52 1.8
544,619 + 14690 mRNA_6322 0.54 0.1
544,751 + 14690 mRNA_6322 0.85 1.0
544,760 - 14690 mRNA_6322 0.88 0.5
544,814 - -1.2
544,877 - 2.2
544,890 - 1.1
545,170 - -0.7
545,291 + 1.0
545,306 + -0.5
545,316 - -1.3
545,316 + 0.8
545,316 - -3.7
545,328 + 1.4
545,378 - 0.1
545,465 - -0.4
545,466 - 1.7
545,466 - -0.1
545,608 - 1.0
545,848 - 14691 mRNA_6323 0.13 -0.2
545,949 + 14691 mRNA_6323 0.16 1.5
545,974 - 14691 mRNA_6323 0.17 -0.9
546,205 - 14691 mRNA_6323 0.24 0.8
546,732 + 14691 mRNA_6323 0.40 -0.2
547,097 - 14691 mRNA_6323 0.51 0.2
547,362 + 14691 mRNA_6323 0.59 -0.1
547,536 - 14691 mRNA_6323 0.64 -0.1
547,814 - 14691 mRNA_6323 0.72 0.2
547,940 + 14691 mRNA_6323 0.76 0.3
548,274 - 14691 mRNA_6323 0.86 0.2
548,537 - 0.6
548,699 + -0.3
548,856 + 0.4
548,988 + -0.0
548,998 - 0.2
549,140 - -0.3
549,147 - -0.4
549,149 - 0.6
549,149 - 1.3
549,235 + -2.7
549,271 + -0.1
549,280 + 0.6
549,288 + 0.4
549,292 + 0.5
549,296 - -1.1
549,300 + -1.8
549,310 - -1.4
549,312 - 0.4
549,314 + -0.0
549,318 - 0.8
549,318 + 0.7
549,319 - 0.4
549,320 + 0.5
549,324 - 0.3
549,402 - -1.1
549,443 - -0.4
549,451 + -1.4
549,455 + -0.8
549,479 - -0.2
549,533 - -0.1
549,555 - -1.3
549,581 + -1.3
549,647 + 14692 mRNA_6324 0.11 0.1
549,708 - 14692 mRNA_6324 0.13 -2.5