Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6309

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6308: 14676 - K09326 OTX1 homeobox protein OTX1, at 499751 to 502382 14676 mRNA_6309: 14677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 502808 to 503552 14677 mRNA_6310: 14678 - Hypothetical Protein, at 504163 to 504987 14678

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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502,400 + 0.1
502,428 + 0.0
502,507 - -1.0
502,515 + -2.3
502,523 - 0.1
502,526 - -0.2
502,527 - 0.6
502,538 + -0.0
502,540 + 1.3
502,669 + 0.1
502,682 + 0.0
502,690 - 1.5
502,712 + 0.8
502,983 + 14677 mRNA_6309 0.23 1.1
502,987 - 14677 mRNA_6309 0.24 -2.3
503,007 + 14677 mRNA_6309 0.27 -0.2
503,220 - 14677 mRNA_6309 0.55 0.4
503,281 - 14677 mRNA_6309 0.63 -0.3
503,397 - 14677 mRNA_6309 0.79 0.6
503,432 - 14677 mRNA_6309 0.84 1.9
503,728 - -0.0
504,034 + 0.7
504,156 + 0.6