Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6269

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6268: 14636 - HMMPfam-Survival motor neuron protein (SMN)-PF06003, at 404053 to 405342 14636 mRNA_6269: 14637 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 405556 to 407019 14637 mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407745 to 410533 14638

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
405,337 + 2.7
405,603 + 0.7
405,631 - -2.7
405,763 - 14637 mRNA_6269 0.14 1.2
405,950 - 14637 mRNA_6269 0.27 0.3
406,061 - 14637 mRNA_6269 0.34 1.8
406,229 - 14637 mRNA_6269 0.46 0.6
406,775 + 14637 mRNA_6269 0.83 0.1
407,079 - -0.7
407,092 - 0.2
407,096 + 0.6
407,201 - -0.4
407,216 - 0.8
407,230 + 1.0
407,234 - -0.6
407,491 - -1.2
407,503 - -0.2
407,524 - -0.6
407,527 - 0.8
407,535 - -0.6
407,544 - 0.4
407,548 - -1.4
407,552 + 0.1
407,670 - 0.2
407,673 - 1.9
407,680 + 0.3
407,847 - 0.7
407,985 - -0.2
407,994 + -0.2
408,006 + 1.1