Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6253

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6253: 14621 - HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 360247 to 361370 14621 mRNA_6254: 14622 - K20477 RGP1 RAB6A-GEF complex partner protein 2, at 361772 to 365441 14622

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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359,280 + 1.5
359,321 + 0.1
359,321 + -1.2
359,436 + 0.3
359,550 - 0.4
359,692 + -2.4
359,692 - 0.2
359,866 - -0.2
359,892 + 1.0
359,964 + -0.4
360,019 - -1.6
360,032 - 0.5
360,291 + 1.1
360,442 - 14621 mRNA_6253 0.17 0.0
360,549 + 14621 mRNA_6253 0.27 -0.1
360,556 + 14621 mRNA_6253 0.27 0.2
360,611 + 14621 mRNA_6253 0.32 1.0
361,459 - -0.9
361,467 + 0.3
361,475 + 0.8
361,606 - -0.2
361,606 - 0.0
361,647 + 0.2
361,753 - 2.2
361,896 + 0.9
362,056 + -1.7
362,188 + 14622 mRNA_6254 0.11 -1.8
362,343 - 14622 mRNA_6254 0.16 -0.2
362,344 + 14622 mRNA_6254 0.16 -1.1