Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6234

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315731 to 317718 14602 mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318135 to 318876 14603

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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315,055 - 0.3
315,070 + 1.6
315,070 + 0.8
315,335 + 0.3
315,342 - -0.5
315,345 - 1.9
315,346 + 1.2
315,346 + 0.9
315,372 - 0.1
315,381 - -0.8
315,385 - -0.5
315,486 + 0.5
315,517 + -0.5
315,527 + 0.6
315,539 + 1.5
315,578 - 0.9
315,638 - -0.3
315,652 - 0.3
315,656 - -0.6
315,662 + -0.8
315,665 + -0.0
315,665 - -0.4
315,667 - -0.1
315,670 + 0.2
315,671 + 0.6
315,673 + 0.2
315,673 + 1.2
315,676 + 2.0
315,686 - -1.0
315,939 - 14602 mRNA_6234 0.10 1.5
315,967 + 14602 mRNA_6234 0.12 0.4
315,986 + 14602 mRNA_6234 0.13 0.4
316,121 + 14602 mRNA_6234 0.20 0.3
316,392 - 14602 mRNA_6234 0.33 0.4
316,418 + 14602 mRNA_6234 0.35 1.2
316,850 - 14602 mRNA_6234 0.56 -0.1
316,874 + 14602 mRNA_6234 0.57 -0.9
316,880 + 14602 mRNA_6234 0.58 -2.0
317,036 - 14602 mRNA_6234 0.66 -0.2
317,036 - 14602 mRNA_6234 0.66 -0.4
317,601 + -0.1
317,770 - 0.3