Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6217

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6216: 14584 - K03120 TBP, tbp transcription initiation factor TFIID TATA-box-binding protein, at 274096 to 275401 14584 mRNA_6217: 14585 - K17362 ACOT13 acyl-coenzyme A thioesterase 13, at 275731 to 276667 14585 mRNA_6218: 14586 - K03687 GRPE molecular chaperone GrpE, at 277373 to 277948 14586

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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275,419 - 0.4
275,558 + -0.2
275,558 + -1.2
275,559 - 0.8
275,575 + 0.0
275,576 - 0.5
275,576 - -0.1
275,581 - -0.5
275,585 + 1.6
275,591 - 0.9
275,592 + -1.6
275,593 + 0.3
275,596 + 0.6
275,609 + 0.6
275,732 - 0.6
276,001 - 14585 mRNA_6217 0.29 0.2
276,025 - 14585 mRNA_6217 0.31 1.0
276,144 - 14585 mRNA_6217 0.44 -0.9
276,153 - 14585 mRNA_6217 0.45 -0.8
276,584 + -0.1
276,592 - 0.0
276,595 - 0.8
276,904 - 0.6
277,031 + -0.2
277,171 - 1.0
277,194 - 0.7
277,332 - -0.2