Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6155

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133895 to 137413 14522 mRNA_6155: 14523 - Hypothetical Protein, at 137746 to 139265 14523

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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136,943 + 14522 mRNA_6154 0.87 0.9
137,001 - 14522 mRNA_6154 0.88 1.0
137,009 + 14522 mRNA_6154 0.88 0.8
137,129 + 0.6
137,269 - 1.3
137,302 - 1.4
137,364 - 0.4
137,402 + -1.3
137,531 + 1.5
137,654 + -0.2
138,325 - 14523 mRNA_6155 0.38 0.0
138,870 + 14523 mRNA_6155 0.74 0.7
139,017 - 14523 mRNA_6155 0.84 -0.1
139,033 - 14523 mRNA_6155 0.85 -0.8
139,165 - 1.9
139,173 + 1.0
139,177 - -1.5
139,183 + 0.9
139,318 - 1.9
139,322 - 1.2
139,438 - 0.0
139,625 + 1.4
139,752 - 0.4
139,781 + -0.2
139,783 - -1.0
139,805 - 2.1
140,071 + 2.1
140,168 + 1.5