Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6154

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133895 to 137413 14522 mRNA_6155: 14523 - Hypothetical Protein, at 137746 to 139265 14523

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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132,931 + 1.6
133,134 - -0.0
133,280 - -0.6
133,280 + 0.1
133,297 + 0.3
133,297 + 0.3
133,299 + 0.2
133,347 - 0.6
133,402 - -1.0
133,449 - 0.6
133,449 - -0.5
133,456 + 0.2
133,459 - -0.0
133,459 - 0.0
133,462 + 0.1
133,474 - 0.9
133,474 - -0.2
133,475 + 0.7
133,476 - -0.5
133,498 - -0.0
133,498 + 0.4
133,506 + -0.0
133,509 + 2.2
133,597 + -0.2
133,600 - 0.8
133,618 - -0.1
133,628 + 0.7
133,630 - 1.5
133,632 - -0.1
133,639 + 0.3
133,648 - -0.8
133,663 - -0.5
133,669 + 1.0
133,672 - 1.0
133,677 - -0.3
133,689 - -0.4
133,845 + -0.0
133,961 + 0.3
133,984 + -0.3
134,120 + 0.9
134,121 - 0.5
134,125 + 2.4
134,129 - 0.3
134,262 + 14522 mRNA_6154 0.10 0.9
134,545 - 14522 mRNA_6154 0.18 -0.4
134,561 - 14522 mRNA_6154 0.19 1.1
134,574 + 14522 mRNA_6154 0.19 2.5
134,594 + 14522 mRNA_6154 0.20 0.3
134,600 - 14522 mRNA_6154 0.20 1.1
134,832 - 14522 mRNA_6154 0.27 0.4
134,846 - 14522 mRNA_6154 0.27 1.6
134,847 - 14522 mRNA_6154 0.27 0.8
134,865 + 14522 mRNA_6154 0.28 0.8
135,016 + 14522 mRNA_6154 0.32 1.0
135,137 + 14522 mRNA_6154 0.35 0.9
135,219 - 14522 mRNA_6154 0.38 1.2
135,427 + 14522 mRNA_6154 0.44 0.7
135,523 - 14522 mRNA_6154 0.46 1.0
135,543 + 14522 mRNA_6154 0.47 0.5
135,573 - 14522 mRNA_6154 0.48 1.8
135,916 - 14522 mRNA_6154 0.57 1.1
136,134 + 14522 mRNA_6154 0.64 1.1
136,139 + 14522 mRNA_6154 0.64 1.0
136,187 - 14522 mRNA_6154 0.65 1.2
136,260 - 14522 mRNA_6154 0.67 0.6
136,283 - 14522 mRNA_6154 0.68 1.3
136,300 + 14522 mRNA_6154 0.68 0.5
136,334 - 14522 mRNA_6154 0.69 0.8
136,477 + 14522 mRNA_6154 0.73 0.6
136,716 - 14522 mRNA_6154 0.80 1.0
136,943 + 14522 mRNA_6154 0.87 0.9
137,001 - 14522 mRNA_6154 0.88 1.0
137,009 + 14522 mRNA_6154 0.88 0.8
137,129 + 0.6
137,269 - 1.3
137,302 - 1.4
137,364 - 0.4
137,402 + -1.3
137,531 + 1.5
137,654 + -0.2
138,325 - 14523 mRNA_6155 0.38 0.0