Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6113

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480 mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481 mRNA_6114: 14482 - Hypothetical Protein, at 25220 to 26095 14482

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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19,160 + 14480 mRNA_6112 0.68 -0.9
19,160 + 14480 mRNA_6112 0.68 -0.7
19,242 + 14480 mRNA_6112 0.72 0.2
19,332 - 14480 mRNA_6112 0.76 0.6
19,368 + 14480 mRNA_6112 0.78 1.8
19,396 + 14480 mRNA_6112 0.79 1.3
19,505 + 14480 mRNA_6112 0.84 0.2
19,511 + 14480 mRNA_6112 0.84 1.2
19,589 - 14480 mRNA_6112 0.88 -0.3
19,615 - 14480 mRNA_6112 0.89 -0.2
19,762 - -0.6
19,763 + -0.3
19,767 - 2.2
19,778 - 0.4
19,789 + 0.2
19,796 + 0.4
19,916 - -0.2
19,922 + 0.8
19,926 + 1.0
19,930 + 1.1
19,932 + 0.3
19,946 + 2.4
20,080 + -0.3
20,205 - 0.9
20,470 + 14481 mRNA_6113 0.10 -0.7
20,606 - 14481 mRNA_6113 0.13 -1.5
20,828 - 14481 mRNA_6113 0.18 -1.2
21,984 + 14481 mRNA_6113 0.42 0.6
22,046 + 14481 mRNA_6113 0.43 0.7
22,179 + 14481 mRNA_6113 0.46 -0.5
22,314 + 14481 mRNA_6113 0.48 -0.1
22,478 + 14481 mRNA_6113 0.52 -1.6
22,533 + 14481 mRNA_6113 0.53 -0.2
22,680 - 14481 mRNA_6113 0.56 1.0
22,881 - 14481 mRNA_6113 0.60 0.8
22,887 + 14481 mRNA_6113 0.60 -0.5
22,887 + 14481 mRNA_6113 0.60 -0.0
22,985 - 14481 mRNA_6113 0.62 -1.2
23,003 - 14481 mRNA_6113 0.63 1.3
23,010 - 14481 mRNA_6113 0.63 2.5
23,010 - 14481 mRNA_6113 0.63 -1.5
23,010 - 14481 mRNA_6113 0.63 -0.8
23,015 - 14481 mRNA_6113 0.63 -0.0
23,016 + 14481 mRNA_6113 0.63 -0.2
23,017 - 14481 mRNA_6113 0.63 3.4
23,301 + 14481 mRNA_6113 0.69 -1.0
23,310 - 14481 mRNA_6113 0.69 -0.1
23,594 - 14481 mRNA_6113 0.75 0.3
23,673 + 14481 mRNA_6113 0.77 -1.1
23,769 + 14481 mRNA_6113 0.79 -0.3
23,770 + 14481 mRNA_6113 0.79 1.2
23,937 - 14481 mRNA_6113 0.82 -1.5
24,044 - 14481 mRNA_6113 0.84 0.6
24,083 + 14481 mRNA_6113 0.85 -1.2
24,160 + 14481 mRNA_6113 0.87 0.8
24,221 - 14481 mRNA_6113 0.88 0.2
24,280 + 14481 mRNA_6113 0.89 -0.5
24,283 - 14481 mRNA_6113 0.89 -1.5
24,327 + -0.1
24,337 - -1.3
24,337 - -1.0
24,344 + 0.9
24,392 - 0.5
24,441 + -1.8
24,495 - 0.4
24,552 - -0.9
24,555 + -1.5
24,639 + -1.0
24,665 - 0.9
24,666 - 0.2
24,805 + 0.3
25,098 + -0.6
25,124 - 0.8
25,227 + 1.0
25,495 + 14482 mRNA_6114 0.31 0.2
25,675 + 14482 mRNA_6114 0.52 -0.5
25,801 - 14482 mRNA_6114 0.66 -0.6