Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6110

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12198 to 14626 14477 mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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14,377 + 14477 mRNA_6109 0.90 -0.1
14,420 + 0.8
14,518 - 1.5
14,520 + 0.0
14,652 + 0.2
14,654 - 0.1
14,676 + -0.8
14,687 + 0.2
14,782 - -0.3
14,806 - -0.5
14,921 + 0.3
14,942 - -1.2
14,949 + 0.9
14,979 - -0.2
14,986 - 0.1
15,116 - -0.7
15,117 + -1.4
15,118 + -0.3
15,130 + 0.2
15,245 - 14478 mRNA_6110 0.25 0.5
15,256 + 14478 mRNA_6110 0.27 1.0
15,281 - 14478 mRNA_6110 0.30 1.5
15,308 + 14478 mRNA_6110 0.34 -0.3
15,311 + 14478 mRNA_6110 0.35 0.5
15,544 - 14478 mRNA_6110 0.68 -0.3
15,693 - 14478 mRNA_6110 0.89 0.4
15,705 + 1.0
15,765 - 1.3
15,862 + 0.3
16,319 + 14479 mRNA_6111 0.16 0.5
16,533 + 14479 mRNA_6111 0.30 0.1
16,535 - 14479 mRNA_6111 0.30 0.1
16,665 + 14479 mRNA_6111 0.38 -0.5
16,681 + 14479 mRNA_6111 0.40 -0.6
16,681 + 14479 mRNA_6111 0.40 0.1
16,689 + 14479 mRNA_6111 0.40 1.0
16,719 + 14479 mRNA_6111 0.42 1.1