Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6103

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6102: 14470 - K14827 IPI1, TEX10 pre-rRNA-processing protein IPI1, at 1660120 to 1663221 14470 mRNA_6103: 14471 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 1663795 to 1664238 14471 mRNA_6104: 14472 - Hypothetical Protein, at 1664602 to 1665579 14472

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,663,189 - 0.0
1,663,259 - 1.1
1,663,290 - -0.9
1,663,291 - -2.7
1,663,292 - -0.6
1,663,437 + 1.2
1,663,439 - 0.2
1,663,443 + -0.6
1,663,450 + -1.4
1,663,453 - 0.4
1,663,453 - 0.1
1,663,456 + -1.9
1,663,464 + 0.5
1,663,558 - -0.7
1,663,572 - -1.1
1,663,590 - -0.5
1,663,602 + -0.3
1,663,645 + -0.5
1,663,723 + -1.8
1,663,737 - -0.5
1,663,738 + -0.2
1,663,739 + 0.3
1,663,913 - 14471 mRNA_6103 0.27 -1.9
1,663,916 + 14471 mRNA_6103 0.27 -0.4
1,664,029 - 14471 mRNA_6103 0.53 -0.2
1,664,468 - -0.0
1,664,887 - 14472 mRNA_6104 0.29 -0.9
1,664,928 - 14472 mRNA_6104 0.33 0.4