Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6091

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1624462 to 1625947 14458 mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1626072 to 1627990 14459 mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,625,252 - 14458 mRNA_6090 0.53 -0.5
1,625,268 + 14458 mRNA_6090 0.54 -0.0
1,625,372 - 14458 mRNA_6090 0.61 2.0
1,625,438 - 14458 mRNA_6090 0.66 -0.3
1,625,532 - 14458 mRNA_6090 0.72 -0.4
1,625,846 - 0.6
1,625,847 + -0.5
1,625,851 - 0.0
1,625,861 - 0.9
1,625,883 - 1.3
1,626,053 + -1.0
1,626,084 - 1.3
1,626,440 - 14459 mRNA_6091 0.19 1.2
1,626,740 - 14459 mRNA_6091 0.35 -0.9
1,626,886 + 14459 mRNA_6091 0.42 -1.0
1,627,050 + 14459 mRNA_6091 0.51 -0.5
1,627,313 + 14459 mRNA_6091 0.65 2.0
1,627,583 - 14459 mRNA_6091 0.79 1.2
1,627,595 + 14459 mRNA_6091 0.79 0.2
1,627,627 - 14459 mRNA_6091 0.81 0.2
1,627,840 - 1.3
1,627,883 - -2.0
1,627,909 + 1.4
1,627,912 + 1.0
1,627,920 + -0.1
1,628,036 + -0.5
1,628,204 + -0.5
1,628,218 + -1.4
1,628,470 + -0.8
1,628,473 + -0.1
1,628,484 - 1.2
1,628,686 - 14460 mRNA_6092 0.15 -0.4