Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6004

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6003: 14371 - K14792 RRP5, PDCD11 rRNA biogenesis protein RRP5, at 1429662 to 1434924 14371 mRNA_6004: 14372 - SUPERFAMILY--SSF52047, at 1435103 to 1436492 14372 mRNA_6005: 14373 - Hypothetical Protein, at 1436776 to 1437486 14373

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,435,019 - -1.4
1,435,074 - -0.5
1,435,378 + 14372 mRNA_6004 0.20 -0.8
1,435,523 + 14372 mRNA_6004 0.30 -0.4
1,435,556 - 14372 mRNA_6004 0.33 -1.3
1,436,159 + 14372 mRNA_6004 0.76 -1.0
1,436,251 + 14372 mRNA_6004 0.83 -2.3
1,436,254 - 14372 mRNA_6004 0.83 -0.5
1,436,419 + -0.0
1,436,688 - -0.2
1,436,701 + -1.2
1,436,741 + 0.5
1,436,823 + -0.3
1,436,845 + 0.5
1,436,965 - 14373 mRNA_6005 0.27 -0.0
1,437,453 + 0.6