Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5976

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1361032 to 1363169 14343 mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1363510 to 1364859 14344 mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121 14345

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,362,638 + 14343 mRNA_5975 0.75 -0.2
1,362,984 + 0.0
1,363,116 - 0.0
1,363,134 + 0.5
1,363,269 - 0.6
1,363,286 + 0.4
1,363,299 + 1.0
1,363,300 + -0.1
1,363,419 - -0.2
1,363,442 - 0.5
1,363,537 + -0.1
1,363,742 + 14344 mRNA_5976 0.17 -0.4
1,363,979 - 14344 mRNA_5976 0.35 0.3
1,364,147 - 14344 mRNA_5976 0.47 0.9
1,364,579 + 14344 mRNA_5976 0.79 1.8
1,364,697 - 14344 mRNA_5976 0.88 -0.6
1,364,897 - 1.3
1,365,020 + 1.6
1,365,700 + 14345 mRNA_5977 0.24 0.8