Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5946

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5945: 14313 - Hypothetical Protein, at 1295302 to 1296454 14313 mRNA_5946: 14314 - Hypothetical Protein, at 1296750 to 1297889 14314 mRNA_5947: 14315 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 1298029 to 1303055 14315

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,295,814 + 14313 mRNA_5945 0.44 -1.5
1,295,936 - 14313 mRNA_5945 0.55 -0.3
1,296,097 + 14313 mRNA_5945 0.69 -1.3
1,296,214 - 14313 mRNA_5945 0.79 0.3
1,296,254 - 14313 mRNA_5945 0.83 -2.6
1,296,363 + 1.0
1,296,363 + -1.7
1,296,403 + -0.4
1,296,517 - 0.8
1,296,936 - 14314 mRNA_5946 0.16 -0.1
1,297,088 + 14314 mRNA_5946 0.30 0.3
1,297,090 - 14314 mRNA_5946 0.30 0.4
1,297,100 + 14314 mRNA_5946 0.31 0.1
1,297,251 - 14314 mRNA_5946 0.44 -0.8
1,297,261 + 14314 mRNA_5946 0.45 0.6
1,297,272 - 14314 mRNA_5946 0.46 0.9
1,297,365 - 14314 mRNA_5946 0.54 -1.4
1,297,531 - 14314 mRNA_5946 0.69 0.7
1,297,664 + 14314 mRNA_5946 0.80 0.3
1,297,681 + 14314 mRNA_5946 0.82 0.1
1,297,845 - 0.2
1,297,973 + 0.1
1,297,987 - 0.4
1,298,243 - -0.7
1,298,299 + 0.3
1,298,435 + 0.2
1,298,444 + 0.8