Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5937

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5936: 14304 - HMMPfam-Homeobox domain-PF00046,HMMPfam-Predicted membrane protein (DUF2231)-PF09990,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1272303 to 1276279 14304 mRNA_5937: 14305 - Hypothetical Protein, at 1276675 to 1277757 14305 mRNA_5938: 14306 - Hypothetical Protein, at 1278732 to 1279189 14306

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,276,027 - -0.3
1,276,176 + 1.7
1,276,322 - -0.6
1,276,438 - 0.5
1,276,438 + 0.3
1,276,443 - -0.2
1,276,468 - -1.9
1,276,842 + 14305 mRNA_5937 0.15 0.5
1,277,113 + 14305 mRNA_5937 0.40 0.6
1,277,236 - 14305 mRNA_5937 0.52 0.2
1,277,381 - 14305 mRNA_5937 0.65 -1.0
1,277,382 + 14305 mRNA_5937 0.65 1.3
1,277,386 - 14305 mRNA_5937 0.66 0.2
1,277,667 + 0.1
1,277,726 + 0.9
1,277,998 + -0.5
1,278,070 + 1.4
1,278,073 - 2.4
1,278,074 + 0.8
1,278,102 - 0.7
1,278,114 - 0.7
1,278,143 + 0.4
1,278,254 - -0.1
1,278,430 - 0.3
1,278,434 - 0.2
1,278,487 + 0.1
1,278,537 - 0.8
1,278,553 + 0.4
1,278,554 + 0.2
1,278,612 + -0.2
1,278,665 + -1.4
1,278,692 - 0.1
1,278,718 + 0.2
1,278,724 + 1.2