Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5915

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5914: 14282 - HMMPfam-Nuclear protein Es2-PF09751, at 1232293 to 1234588 14282 mRNA_5915: 14283 - HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474, at 1235017 to 1236924 14283

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,234,602 - -1.3
1,234,640 - -0.5
1,234,642 + -0.2
1,234,662 - 1.0
1,234,763 + 0.9
1,234,777 - -3.4
1,235,077 + 1.2
1,235,235 + 14283 mRNA_5915 0.11 -0.0
1,235,495 + 14283 mRNA_5915 0.25 2.1
1,235,532 - 14283 mRNA_5915 0.27 2.7
1,235,561 - 14283 mRNA_5915 0.29 -0.8
1,235,815 - 14283 mRNA_5915 0.42 -0.5
1,235,972 + 14283 mRNA_5915 0.50 0.3
1,236,074 - 14283 mRNA_5915 0.55 -1.0
1,236,086 + 14283 mRNA_5915 0.56 -1.3
1,236,089 - 14283 mRNA_5915 0.56 0.2
1,236,114 - 14283 mRNA_5915 0.57 0.3
1,236,242 - 14283 mRNA_5915 0.64 2.1
1,236,249 + 14283 mRNA_5915 0.65 -0.1
1,236,258 + 14283 mRNA_5915 0.65 -0.6
1,236,271 - 14283 mRNA_5915 0.66 0.1
1,236,386 + 14283 mRNA_5915 0.72 1.9
1,236,389 - 14283 mRNA_5915 0.72 -0.7
1,236,812 + -2.5
1,236,851 - 1.2
1,236,974 - -0.0
1,237,372 - 0.8
1,237,517 + -0.7
1,237,669 - -0.2
1,237,670 + -1.4
1,237,697 + -0.3
1,237,705 - 0.5
1,237,705 + 1.5
1,237,706 - -3.6
1,237,831 - 0.3
1,237,832 + 0.6
1,237,847 - -0.1
1,237,851 - 1.9
1,237,854 + 1.1