Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5914

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5913: 14281 - K14455 GOT2 aspartate aminotransferase, mitochondrial, at 1230072 to 1231795 14281 mRNA_5914: 14282 - HMMPfam-Nuclear protein Es2-PF09751, at 1232293 to 1234588 14282 mRNA_5915: 14283 - HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474, at 1235017 to 1236924 14283

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,231,359 - 14281 mRNA_5913 0.75 -0.9
1,231,395 + 14281 mRNA_5913 0.77 -1.2
1,231,415 - 14281 mRNA_5913 0.78 0.7
1,231,542 - 14281 mRNA_5913 0.85 -0.2
1,231,686 - -2.7
1,231,694 - -0.2
1,231,817 + 1.3
1,231,818 - -1.2
1,231,839 - -0.2
1,231,886 - 1.0
1,231,972 - 1.4
1,231,974 - -1.0
1,231,976 - 1.3
1,231,978 - 1.4
1,231,984 - 0.3
1,231,987 + 1.4
1,231,999 + 0.4
1,232,001 + 1.9
1,232,025 - 0.2
1,232,049 - 0.7
1,232,110 - 0.6
1,232,116 - 0.6
1,232,152 + -0.6
1,232,157 - 0.6
1,232,173 + 0.1
1,232,309 + -1.2
1,232,498 + 0.4
1,232,605 + 14282 mRNA_5914 0.14 0.9
1,233,617 + 14282 mRNA_5914 0.58 -0.7
1,233,760 - 14282 mRNA_5914 0.64 -0.8
1,233,762 + 14282 mRNA_5914 0.64 -1.1
1,233,909 + 14282 mRNA_5914 0.70 0.6
1,234,602 - -1.3
1,234,640 - -0.5
1,234,642 + -0.2
1,234,662 - 1.0
1,234,763 + 0.9
1,234,777 - -3.4
1,235,077 + 1.2
1,235,235 + 14283 mRNA_5915 0.11 -0.0
1,235,495 + 14283 mRNA_5915 0.25 2.1
1,235,532 - 14283 mRNA_5915 0.27 2.7
1,235,561 - 14283 mRNA_5915 0.29 -0.8