Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5908

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5907: 14275 - K02726 PSMA2 20S proteasome subunit alpha 2, at 1217461 to 1218756 14275 mRNA_5908: 14276 - Hypothetical Protein, at 1218937 to 1220289 14276 mRNA_5909: 14277 - K00077 panE, apbA 2-dehydropantoate 2-reductase, at 1220676 to 1222238 14277

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,218,912 - 0.2
1,219,000 + -0.0
1,219,074 + 14276 mRNA_5908 0.10 0.7
1,219,082 + 14276 mRNA_5908 0.11 0.6
1,219,094 - 14276 mRNA_5908 0.12 -0.4
1,219,112 - 14276 mRNA_5908 0.13 -0.2
1,219,124 + 14276 mRNA_5908 0.14 -0.0
1,219,126 - 14276 mRNA_5908 0.14 -1.6
1,219,129 - 14276 mRNA_5908 0.14 -0.5
1,219,132 + 14276 mRNA_5908 0.14 -0.1
1,219,143 - 14276 mRNA_5908 0.15 -0.4
1,219,151 - 14276 mRNA_5908 0.16 0.0
1,219,172 - 14276 mRNA_5908 0.17 0.2
1,219,174 - 14276 mRNA_5908 0.18 0.3
1,219,195 - 14276 mRNA_5908 0.19 -0.3
1,219,203 - 14276 mRNA_5908 0.20 1.3
1,219,210 + 14276 mRNA_5908 0.20 -0.6
1,219,235 - 14276 mRNA_5908 0.22 0.0
1,219,297 + 14276 mRNA_5908 0.27 -0.9
1,219,327 - 14276 mRNA_5908 0.29 0.4
1,219,346 + 14276 mRNA_5908 0.30 0.7
1,219,363 - 14276 mRNA_5908 0.31 -0.7
1,219,380 - 14276 mRNA_5908 0.33 -1.2
1,219,396 + 14276 mRNA_5908 0.34 1.1
1,219,407 + 14276 mRNA_5908 0.35 0.9
1,219,420 + 14276 mRNA_5908 0.36 -1.5
1,219,425 - 14276 mRNA_5908 0.36 1.3
1,219,485 + 14276 mRNA_5908 0.41 -0.4
1,219,493 + 14276 mRNA_5908 0.41 0.2
1,219,502 + 14276 mRNA_5908 0.42 -0.3
1,219,502 - 14276 mRNA_5908 0.42 -1.2
1,219,536 - 14276 mRNA_5908 0.44 -0.9
1,219,565 - 14276 mRNA_5908 0.46 0.1
1,219,596 + 14276 mRNA_5908 0.49 -0.3
1,219,652 - 14276 mRNA_5908 0.53 -3.0
1,219,670 + 14276 mRNA_5908 0.54 0.1
1,219,682 - 14276 mRNA_5908 0.55 0.2
1,219,691 - 14276 mRNA_5908 0.56 0.1
1,219,697 + 14276 mRNA_5908 0.56 1.6
1,219,711 + 14276 mRNA_5908 0.57 -0.2
1,219,716 - 14276 mRNA_5908 0.58 -1.4
1,219,716 + 14276 mRNA_5908 0.58 0.9
1,219,717 + 14276 mRNA_5908 0.58 -0.3
1,219,719 + 14276 mRNA_5908 0.58 -0.5
1,219,719 + 14276 mRNA_5908 0.58 -0.0
1,219,731 - 14276 mRNA_5908 0.59 1.8
1,219,732 + 14276 mRNA_5908 0.59 -0.3
1,219,740 + 14276 mRNA_5908 0.59 -1.8
1,219,749 + 14276 mRNA_5908 0.60 0.4
1,219,762 + 14276 mRNA_5908 0.61 0.6
1,219,765 - 14276 mRNA_5908 0.61 -0.7
1,219,782 - 14276 mRNA_5908 0.62 0.3
1,219,785 - 14276 mRNA_5908 0.63 0.1
1,219,833 - 14276 mRNA_5908 0.66 -0.5
1,219,835 + 14276 mRNA_5908 0.66 0.1
1,219,839 + 14276 mRNA_5908 0.67 -0.6
1,219,853 - 14276 mRNA_5908 0.68 0.7
1,219,894 + 14276 mRNA_5908 0.71 0.1
1,219,922 + 14276 mRNA_5908 0.73 -1.3
1,219,963 + 14276 mRNA_5908 0.76 0.7
1,219,977 - 14276 mRNA_5908 0.77 -0.5
1,219,990 + 14276 mRNA_5908 0.78 1.7
1,220,019 + 14276 mRNA_5908 0.80 -1.0
1,220,021 + 14276 mRNA_5908 0.80 0.5
1,220,048 - 14276 mRNA_5908 0.82 -0.0
1,220,049 + 14276 mRNA_5908 0.82 0.9
1,220,063 + 14276 mRNA_5908 0.83 0.2
1,220,077 + 14276 mRNA_5908 0.84 -0.6
1,220,095 - 14276 mRNA_5908 0.86 0.7
1,220,106 + 14276 mRNA_5908 0.86 -0.2
1,220,121 - 14276 mRNA_5908 0.88 -1.0
1,220,152 + 14276 mRNA_5908 0.90 -0.9
1,220,158 + -0.3
1,220,162 + -1.2
1,220,167 - -0.2
1,220,179 + 0.3
1,220,200 + -0.1
1,220,229 - 0.3
1,220,468 + 0.6
1,220,523 + 0.3