Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5849

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5849: 14217 - SMART-Furin-like repeats-SM00261,SUPERFAMILY--SSF57184, at 1079850 to 1082159 14217 mRNA_5850: 14218 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1082825 to 1084341 14218

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,079,040 + 0.2
1,079,158 - -0.2
1,079,459 + 0.9
1,079,886 - -0.1
1,080,039 - -1.6
1,080,193 - 14217 mRNA_5849 0.15 1.0
1,080,282 - 14217 mRNA_5849 0.19 0.3
1,080,600 - 14217 mRNA_5849 0.32 -1.8
1,080,677 - 14217 mRNA_5849 0.36 0.7
1,080,729 - 14217 mRNA_5849 0.38 0.8
1,080,756 - 14217 mRNA_5849 0.39 -0.8
1,081,019 - 14217 mRNA_5849 0.51 -0.2
1,081,320 - 14217 mRNA_5849 0.64 -0.6
1,081,347 - 14217 mRNA_5849 0.65 -1.3
1,081,792 - 14217 mRNA_5849 0.84 0.8
1,081,928 + 14217 mRNA_5849 0.90 -0.2
1,082,044 + 2.9
1,082,197 + -0.8
1,082,363 - 0.5
1,082,369 - -0.3
1,082,381 - 0.4
1,082,525 - 0.2
1,082,785 - 0.4
1,083,105 + 14218 mRNA_5850 0.18 0.5