Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5806

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979008 to 980217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980969 to 985772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986328 to 987350 14175

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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980,025 - 14173 mRNA_5805 0.84 -1.4
980,274 - -0.9
980,277 - -0.6
980,312 + 1.1
980,312 + -2.2
980,326 - -0.3
980,334 - 0.2
980,457 - -0.5
980,743 + 1.4
980,946 + 0.6
981,814 + 14174 mRNA_5806 0.18 -0.6
982,114 + 14174 mRNA_5806 0.24 0.7
982,410 - 14174 mRNA_5806 0.30 1.0
982,850 + 14174 mRNA_5806 0.39 -1.8
985,896 + 0.3
985,987 - -0.0
986,003 + -2.2
986,106 - -0.4
986,121 + 0.4
986,125 - 0.7
986,125 - -1.2
986,126 - -1.1
986,131 + 0.2
986,131 - 0.9
986,138 + 0.6
986,144 - -0.7
986,144 - 0.9
986,150 - -0.1
986,154 + 0.6
986,158 + 0.1
986,161 - -0.0
986,161 + 1.0
986,261 + -1.1
986,267 - 0.6
986,270 + -0.2
986,271 - 0.4
986,271 + -0.0
986,272 - -0.5
986,275 - -1.6
986,295 + -1.7
986,296 - 0.3
986,300 + -0.2
986,301 + -0.1
986,456 + 14175 mRNA_5807 0.13 -0.5