Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5802

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972859 to 974663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974820 to 975968 14170 mRNA_5803: 14171 - Hypothetical Protein, at 976295 to 977367 14171

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
973,821 - 14169 mRNA_5801 0.53 0.6
973,951 + 14169 mRNA_5801 0.60 -2.2
974,411 - 14169 mRNA_5801 0.86 0.8
974,834 - -0.9
975,757 - 14170 mRNA_5802 0.82 0.1
975,761 - 14170 mRNA_5802 0.82 -0.6
975,771 - 14170 mRNA_5802 0.83 1.4
975,771 - 14170 mRNA_5802 0.83 0.6
975,910 - -1.2
975,924 + -0.7
975,927 + 1.2
976,092 + 1.6
976,218 - 0.4
976,221 + 1.3
976,231 + -1.8
976,359 - 0.3
976,474 + 14171 mRNA_5803 0.17 -0.1
976,500 - 14171 mRNA_5803 0.19 -0.2
976,602 - 14171 mRNA_5803 0.29 -0.3
976,698 - 14171 mRNA_5803 0.38 0.7
976,958 - 14171 mRNA_5803 0.62 0.8