Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5795

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955473 to 957559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957855 to 959394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959375 to 960569 14164

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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956,862 + 14162 mRNA_5794 0.67 -2.2
956,899 + 14162 mRNA_5794 0.68 -0.5
957,188 - 14162 mRNA_5794 0.82 -1.1
957,604 + 0.6
957,611 - 0.2
957,653 - -0.0
957,780 - -0.5
957,780 + 0.9
957,781 + -0.7
957,872 + 0.9
957,873 - 0.7
957,913 - -1.4
957,922 + -0.1
958,050 + 14163 mRNA_5795 0.13 -0.2
958,374 + 14163 mRNA_5795 0.34 -0.3
958,534 - 14163 mRNA_5795 0.44 0.7
958,935 + 14163 mRNA_5795 0.70 0.6
959,260 - -0.6
959,399 + 1.1
959,657 - 14164 mRNA_5796 0.24 -0.2
959,967 - 14164 mRNA_5796 0.50 0.5
960,321 - 14164 mRNA_5796 0.79 0.7