Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5790

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5789: 14157 - KOG2859 DNA repair protein, member of the recA/RAD51 family, at 944648 to 945829 14157 mRNA_5790: 14158 - K01054 MGLL acylglycerol lipase, at 945926 to 947446 14158 mRNA_5791: 14159 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 947999 to 949301 14159

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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945,101 + 14157 mRNA_5789 0.38 -0.3
945,139 - 14157 mRNA_5789 0.42 0.3
945,186 - 14157 mRNA_5789 0.46 -1.1
945,252 + 14157 mRNA_5789 0.51 0.4
945,329 + 14157 mRNA_5789 0.58 -0.6
945,390 + 14157 mRNA_5789 0.63 0.5
945,579 + 14157 mRNA_5789 0.79 0.6
945,596 - 14157 mRNA_5789 0.80 0.3
945,689 - 14157 mRNA_5789 0.88 -1.8
945,741 - 0.1
945,745 - 1.7
945,750 - -0.6
946,005 - -1.9
946,033 + -2.3
946,163 - 14158 mRNA_5790 0.16 -0.1
946,196 + 14158 mRNA_5790 0.18 -2.5
946,604 - 14158 mRNA_5790 0.45 -1.0
946,774 + 14158 mRNA_5790 0.56 1.5
946,792 - 14158 mRNA_5790 0.57 2.1
946,895 + 14158 mRNA_5790 0.64 -0.5
947,081 - 14158 mRNA_5790 0.76 -0.6
947,087 + 14158 mRNA_5790 0.76 -0.4
947,097 + 14158 mRNA_5790 0.77 -0.8
947,183 + 14158 mRNA_5790 0.83 0.6
947,208 + 14158 mRNA_5790 0.84 0.1
947,321 + 2.4
947,468 - -0.5
947,468 - 0.1
947,469 - -0.1
947,483 + 1.7
947,485 + 0.3
947,485 - 1.7
947,609 - -0.7
947,611 - -0.1
947,622 + 0.3
947,773 + -0.7
947,921 - 0.4
947,950 - 0.2