Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5781

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5780: 14148 - KOG2989 Uncharacterized conserved protein, at 927066 to 928208 14148 mRNA_5781: 14149 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 928807 to 930630 14149 mRNA_5782: 14150 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 931244 to 933171 14150

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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928,382 + -1.3
928,689 + 0.0
928,977 + -0.0
928,989 - -1.5
929,118 + 14149 mRNA_5781 0.17 -0.6
929,122 - 14149 mRNA_5781 0.17 0.1
929,407 - 14149 mRNA_5781 0.33 -1.7
929,412 - 14149 mRNA_5781 0.33 -0.4
929,546 - 14149 mRNA_5781 0.41 -1.3
929,557 + 14149 mRNA_5781 0.41 0.1
929,570 + 14149 mRNA_5781 0.42 2.6
929,691 - 14149 mRNA_5781 0.48 0.5
929,696 - 14149 mRNA_5781 0.49 -0.4
929,854 - 14149 mRNA_5781 0.57 -0.9
929,978 - 14149 mRNA_5781 0.64 0.2
930,126 + 14149 mRNA_5781 0.72 -0.5
930,316 + 14149 mRNA_5781 0.83 -0.3
930,548 - 0.0
930,713 - 0.4
930,834 + 0.6
930,893 - 0.2
931,019 - -1.2
931,039 - 1.7
931,047 + -0.1
931,047 + 1.2
931,049 + -0.8
931,628 - 14150 mRNA_5782 0.20 0.3