Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5747

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5746: 14114 - Hypothetical Protein, at 847090 to 848966 14114 mRNA_5747: 14115 - HMMPfam-F-box-like-PF12937, at 849321 to 849879 14115 mRNA_5748: 14116 - K12260 SRX1 sulfiredoxin, at 850199 to 850740 14116 mRNA_5749: 14117 - K14863 YTM1, WDR12 ribosome biogenesis protein YTM1, at 850865 to 852979 14117

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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848,383 + 14114 mRNA_5746 0.69 1.0
848,549 + 14114 mRNA_5746 0.78 -0.6
848,692 - 14114 mRNA_5746 0.85 0.4
848,725 + 14114 mRNA_5746 0.87 1.3
848,855 - 0.3
849,015 - 1.3
849,161 + 0.2
849,219 + -1.3
849,515 - 14115 mRNA_5747 0.35 0.1
849,640 - 14115 mRNA_5747 0.57 1.5
849,661 - 14115 mRNA_5747 0.61 0.3
849,776 - 14115 mRNA_5747 0.81 -0.2
849,802 + 14115 mRNA_5747 0.86 0.2
849,804 - 14115 mRNA_5747 0.86 0.3
849,949 - -0.3
849,964 - 0.9
849,969 + 0.6
850,105 + 0.1
850,260 + 14116 mRNA_5748 0.11 1.0
850,261 - 14116 mRNA_5748 0.11 0.3
850,263 + 14116 mRNA_5748 0.12 0.4
850,280 + 14116 mRNA_5748 0.15 2.0
850,291 - 14116 mRNA_5748 0.17 -0.0
850,558 - 14116 mRNA_5748 0.66 0.1
850,567 + 14116 mRNA_5748 0.68 -0.6