Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5737

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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814,074 + 1.1
814,080 + -0.8
814,106 + 0.1
814,110 + 0.7
814,117 + 0.3
814,120 + 1.3
814,122 + -0.0
814,213 - -0.5
814,226 - -0.4
814,240 - 0.0
814,244 + -1.3
814,261 - -0.4
814,262 - -0.0
814,374 - -0.9
814,379 + -0.3
814,648 - 14105 mRNA_5737 0.42 -1.9
814,785 - 14105 mRNA_5737 0.61 -1.1
814,951 - 14105 mRNA_5737 0.85 -1.4
815,116 + 0.0
815,144 - -1.2
815,592 - 14106 mRNA_5738 0.11 -1.9