Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5722

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5721: 14089 - K19219 JMJD7 jumonji domain-containing protein 7, at 768732 to 770042 14089 mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
769,397 - 14089 mRNA_5721 0.51 -0.4
769,503 - 14089 mRNA_5721 0.59 1.6
769,654 - 14089 mRNA_5721 0.70 0.4
769,779 - 14089 mRNA_5721 0.80 0.7
770,223 - -0.3
770,399 - 1.4
770,623 - 14090 mRNA_5722 0.10 2.3
771,267 + 14090 mRNA_5722 0.28 1.3
771,268 + 14090 mRNA_5722 0.28 -0.5
771,334 - 14090 mRNA_5722 0.30 -0.6
771,343 - 14090 mRNA_5722 0.30 -0.0
771,506 - 14090 mRNA_5722 0.35 0.0
772,058 + 14090 mRNA_5722 0.50 1.4
772,193 + 14090 mRNA_5722 0.54 3.0
772,677 - 14090 mRNA_5722 0.68 -0.4
772,814 + 14090 mRNA_5722 0.71 1.4
772,995 + 14090 mRNA_5722 0.76 0.1
773,101 - 14090 mRNA_5722 0.79 1.0
773,403 + 14090 mRNA_5722 0.88 1.5
773,522 - -2.4
773,821 - 1.0
773,822 + -0.3
773,990 + 0.3
774,104 - 0.8
774,140 - 0.0
774,282 - -0.9
774,465 + 14091 mRNA_5723 0.15 -0.2