Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5667

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5667: 14035 - K11233 SSK1 osomolarity two-component system, response regulator SSK1, at 642793 to 648199 14035 mRNA_5668: 14036 - K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, at 648393 to 650754 14036

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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642,214 + 2.0
642,244 + 0.2
642,354 - 1.1
642,607 + -0.3
642,643 - 0.4
642,654 - 0.5
642,656 - 1.0
642,666 + -2.0
642,674 - -1.0
642,686 - -0.3
642,812 - -1.7
642,822 + -3.0
644,521 + 14035 mRNA_5667 0.32 0.1
644,605 + 14035 mRNA_5667 0.34 0.0
645,754 - 14035 mRNA_5667 0.55 -0.5
646,708 + 14035 mRNA_5667 0.72 -2.0
646,810 - 14035 mRNA_5667 0.74 -3.3
647,048 + 14035 mRNA_5667 0.79 -0.3
647,500 + 14035 mRNA_5667 0.87 -1.0
647,524 + 14035 mRNA_5667 0.87 1.5
647,639 + 14035 mRNA_5667 0.90 0.3
647,807 + 1.6
648,379 + 0.6
648,742 + 14036 mRNA_5668 0.15 0.2
648,868 + 14036 mRNA_5668 0.20 0.4
649,135 + 14036 mRNA_5668 0.31 -0.7
649,147 - 14036 mRNA_5668 0.32 -0.3