Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5622

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5621: 13989 - Hypothetical Protein, at 530337 to 531503 13989 mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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531,002 + 13989 mRNA_5621 0.57 -0.8
531,108 - 13989 mRNA_5621 0.66 -1.5
531,251 + 13989 mRNA_5621 0.78 -1.5
531,372 - 13989 mRNA_5621 0.89 -1.2
531,393 + -0.7
531,404 + 0.6
531,404 + -1.1
531,563 - -0.8
531,663 - 0.3
531,664 + -4.2
531,673 - 0.7
531,679 + -0.3
531,679 - 0.4
531,690 - -0.3
531,698 - -0.1
531,700 + -1.7
531,822 - 0.7
531,841 + 0.3
531,881 - -1.4
531,914 - 13990 mRNA_5622 0.11 0.6
531,958 - 13990 mRNA_5622 0.12 -1.2
531,961 - 13990 mRNA_5622 0.13 0.1
531,970 + 13990 mRNA_5622 0.13 -0.2
531,979 - 13990 mRNA_5622 0.13 -1.5
531,983 - 13990 mRNA_5622 0.13 0.0
531,984 + 13990 mRNA_5622 0.14 1.2
531,987 - 13990 mRNA_5622 0.14 -1.6
532,002 + 13990 mRNA_5622 0.14 0.8
532,003 + 13990 mRNA_5622 0.14 0.3
532,127 - 13990 mRNA_5622 0.19 1.6
532,142 - 13990 mRNA_5622 0.20 -0.1
532,291 - 13990 mRNA_5622 0.26 -0.4
532,424 - 13990 mRNA_5622 0.32 0.4
532,534 - 13990 mRNA_5622 0.36 -0.7
532,571 - 13990 mRNA_5622 0.38 0.1
532,863 - 13990 mRNA_5622 0.50 0.3
532,863 - 13990 mRNA_5622 0.50 -1.0
532,981 - 13990 mRNA_5622 0.55 0.0
533,105 - 13990 mRNA_5622 0.60 1.4
533,183 + 13990 mRNA_5622 0.63 0.3
533,322 - 13990 mRNA_5622 0.69 -0.7
533,563 + 13990 mRNA_5622 0.79 0.7
533,727 + 13990 mRNA_5622 0.86 -0.9
534,012 + -1.2
534,155 + -0.3
534,158 - 0.1
534,346 - 0.3
534,423 - 13991 mRNA_5623 0.17 0.5
534,738 - 13991 mRNA_5623 0.53 1.4
534,914 - 13991 mRNA_5623 0.74 1.3
534,951 - 13991 mRNA_5623 0.78 -1.2
534,987 + 13991 mRNA_5623 0.82 -0.2